Timeline and Publications

BioCypher Launch

2021-09-10

Start of BioCypher development.

Preprint publication

2022-12-27

BioCypher preprint v1 published on arXiv.
Read it here

BioChatter Launch

2023-04-03

BioChatter start of development.

Preprint publication

2023-05-10

BioChatter preprint v1 published on arXiv.
Read it here

Journal publication

2023-06-19

BioCypher peer-reviewed in Nature Biotechnology.
Read it here
Read the self-archived version on Zenodo
Read the online version

Hackathon

2023-12-11

ELIXIR BioHackathon Germany 2023; contributions to BioChatter manuscript.

Journal publication

2024-06-18

Perspective on molecular causality in the advent of foundation models in EMBO Molecular Systems Biology.
Read it here

Hackathon

2024-11-04

ELIXIR BioHackathon Europe 2024—Bioconductor, EDAM Ontology, and bio.tools.
Preprint

Hackathon

2024-11-11

ELIXIR Plant community hackathon in Versailles.
Preprint

Hackathon

2024-12-09

ELIXIR BioHackathon Germany 2024; contributions to BioChatter manuscript.

Journal publication

2025-01-22

BioChatter peer-reviewed in Nature Biotechnology.
Read it here

BioGather Launch

2025-02-10

BioGather start of development.

Preprint publication

2025-05-09

Clinical benchmarking study preprint published.
Preprint

Preprint publication

Soon

BioGather preprint v1 published on arXiv.